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Chronic Eosinophilic Leukemia and neoplasms with tyrosine kinase gene fusions

Introduction:

  • Chronic eosinophilic leukaemia is a MPN in which there is autonomous clonal proliferation of eosinophilic precursors resulting in persistently increased numbers of eosinophils in blood (>1500/cmm), bone marrow and peripheral tissues.
  • Patients with BCR-ABL translocations are excluded.
  • Difference between CEL-NOS and hypereosinophilic syndrome is- CEL-NOS is a clonal disorder, i.e. cytogenetic abnormality is present or they have abnormal bone marrow morphology.
  • Definition of Idiopathic HES: It is unexplained elevation of peripheral blood eosinophils (>1500/cmm) for more than 4 weeks associated with end organ damage (Proliferation in this case is not clonal/ secondary)
  • Definition of Idiopathic hypereosiniphilia (Hypereosinophilia of uncertain significance): It is same as above, but there is no end organ damage.

 

Epidemiology:

  • M: F – 1: 1
  • Usually seen at around 40 years

 

Pathogenesis:

  • Tissue damage is due to release of mediators like – Eosinophil cationic protein and major basic protein

 

Clinical Features:

  • 10% are asymptomatic
  • Constitutional symptoms- Fever, fatigue, cough
  • Muscle pain, arthritis, arthralgia, Raynaud's phenomenon
  • Pruritus, papule / plaques, angioedema, mucosal ulcers, vesciculo-bullous lesions
  • Diarrhoea, ascites, gastritis, colitis, pancreatitis, cholangitis, hepatitis, Budd chiary syndrome
  • Restrictive cardiomyopathy due to endomyocardial fibrosis
  • Pericarditismyocarditis, intramural thrombus formation, scarring of mitral / tricuspid values leading to regurgitation
  • Peripheral neuropathy, mononeuritis multiplex, paraparesis, cerebellar dysfunction, epilepsy, dementia, cerebrovascular accident, eosinophilic meningitis
  • CNS dysfunction – Paraparesis, encephalopathy, dementia
  • Pulmonary infiltrates, fibrosis, pleural effusion and pulmonary embolism
  • Others- Microthrombi, vasculitis, retinal arteritis, digital necrosis

 

Investigations:

  • Hemogram
    • WBC count- > 30 x 109 /L
    • Marked eosinophilia – 30 – 70%
    • Mainly mature eosinophils with only few eosinophilic myelocytes or promyelocytes
    • Eosinophils show sparse granulation with clear areas of cytoplasm, cytoplasmic vacuolization, nuclear hypersegmentation /  hyposegmentation (Eosinophil dysplasia)
    • Associated neutrophilia and blasts > 2% prompt the diagnosis of CEL
    • Normo or macrocytic anemia
    • Thrombocytopenia in some cases
  • Bone marrow
    • Hypercellular due to eosinophilic proliferation
    • Orderly maturation of eosinophils seen
    • Charcot – Leyden crystals often present
    • Erythropoiesis – Normal/ dysplastic
    • Myelopoiesis- Dysplasia may be seen.
    • Megakaryopoiesis – Dysplasia is commonly seen (hypolobated/non-lobated nuclei or separated nuclear lobes)
    • Fibrosis may be seen.
    • Marrow should be carefully searched for any process which might explain eosinophilia as a secondary reaction – vasculitis, lymphoma, ALL, granulomatous reaction etc
  • Cytochemistry 
    • Cyanide resistant myeloperoxidase positive
    • Naphthol – ASD – chloroacetate esterase – positive (Normally absent in eosinophils)
  • Immunophenotyping: No specific immunophenotypic abnormalities
  • Cytogenetics
    • Chromosome 5 band 31-35 contains several genes relevant to eosinopoiesis- such as IL5, IL3, GM-CSF, PDGFR beta
    • t (1:5), t (2:5), t (5:12), t (6:11)
    • Other abnormalities include- +8,   i(17q)
    • t (5:12) – chronic myelomonocytic leukaemia with eosinophilia
    • t (8:13) -(p11; q22) & other 8p11 translocations- Related to FGFR1 gene
    • 8p11 syndrome includes – eosinophilic leukemia, AML, precursor T lymphoblastic leukaemia / lymphoma, Precursor B lymphoblastic leukaemia
    • Microdeletion on chromosome 4 leads to fusion of FIP1L1 & PDGFR alfa genes. This results in generation of constitutively active tyrosine kinase. FIP1L1-PDGFRA fusion tyrosine kinase is seen in 50% of HES. Discussed below.
    • age-related loss of the Y chromosome should not be considered as evidence of clonality
  • NGS panel for myeloid mutations:
    • Mutations other than DNMT3A, TET2, and ASXL1 are considered  indicators of a neoplastic process
    • Mutations with variant allele fraction (VAF) <2% should not be used to support clonality
  • Serum cobalamin, uric acid and muramidase- Increased
  • LAP score- Normal
  • Annual echocardiographyTo assess cardiac damage

 

Criteria for Diagnosis CEL-NOS:

Essential criteria

  • AEC >1500/cmm on at least 2 occasions over an interval of at least 4 weeks
  • Evidence of clonality or abnormal bone marrow morphology
  • WHO criteria for other myeloid or lymphoid neoplasms not met

Desirable

  • None

 

Prognosis:

  • Median survival: 2 years
  • Causes of death include infection, bleeding, and disease-related organ failure
  • Poor prognostic markers:
    • Marked splenomegaly
    • High blast count in blood/ bone marrow
    • Cytogenetic abnormalities
    • Dysplastic changes in other myeloid lineages
    • Lack of response to steroids
    • Markedly elevated eosinophil count
    • Normal IgE levels
    • Male sex

 

Pretreatment Work-up: 

  • History
  • Examination:   Spleen:
  • BMA and Bx
  • Haemoglobin
  • TLC, DLC, AEC
  • Platelet count
  • Peripheral smear: For monocytosis, dysplasiaor circulating blasts
  • LFT: Bili- T/D       SGPT:       SGOT: Albumin:     Globulin:
  • Creatinine
  • Uric acid
  • S. IgE levels
  • Vitamin B12 level
  • S. Tryptase level
  • LDH
  • HIV
  • Cytogenetics
  • FISH/ PCR- BCR-ABL1
  • JAK 2
  • CAL-R
  • MPL
  • FISH for PDGFRA
  • FISH for PDGFRB
  • FISH for FGFR1
  • Inv (16)
  • t (16:16)
  • Cardiac Troponin, proBNPECHO and ECG- For end organ damage
  • Chemotherapy consent after informing about disease, prognosis, cost of therapy, side effects, hygiene, food and contraception
  • Tumor board meeting and decision
  • Attach supportive care drug sheet
  • Inform primary care physician

 

Treatment:

  • Treatment of neoplasms with tyrosine kinase gene fusions is discussed separately below.
  • For all other patients (CEL-NOS): A trial of Imatinib can be given. If there is no response, steroids (Prednisolone- 1mg/Kg) can be used. If this also fails, other options include hydroxyurea, IFN-alpha, Vincristine, Etoposide and Cladribine.

 

Myeloid/lymphoid neoplasms with eosinophilia and tyrosine kinase gene fusions

 

They include:

  • Myeloid/ Lymphoid neoplasm with PDGFRA rearrangement
  • Myeloid/Lymphoid Neoplasm with PDGFRB Rearrangement
  • Myeloid/Lymphoid Neoplasm with FGFR1 Rearrangement
  • Myeloid/Lymphoid Neoplasm with JAK2 Rearrangement
  • Myeloid/Lymphoid Neoplasm with FLT3 Rearrangement
  • Myeloid/Lymphoid Neoplasm with ETV6::ABL1fusion
  • Myeloid/Lymphoid Neoplasms with other tyrosine kinase gene fusions

 

Myeloid/ Lymphoid neoplasm with PDGFRA rearrangement

  • Most of them are associated with eosinophilia
  • M:F= 7:1
  • Median age- 5th decade
  • Pathogenesis: Cryptic deletion at 4q12 which leads to formation of FIP1L1-PDGFRA fusion gene
  • Other partners genes include: KIF5B, CDK5RAP2, STRN, ETV6, BCR, and TNKS2
  • t (1:4) and t (4:10) can also lead to this fusion gene formation.
  • Can present with
    • Chronic eosinophilic leukemia
    • MPN in blast crisis
    • AML with eosinophilia
    • T- ALL
    • Myeloid sarcoma
  • Associated with
    • Elevated vitamin B12 levels
    • Elevated S. Tryptase
    • Splenomegaly
  • PS: Eosinophils are large with abnormal distribution of cytoplasmic granules, cytoplasmic vacuolation, abnormal granule size or color, and/or abnormal nuclear lobation
  • BMA: Hypercellular with increased eosinophilic precursors. Dense clusters of mast cells are present
  • RT-PCR/ FISH/ RNA sequencing for PDGFRA fusion
  • Cytogenetics: Additional chromosomal abnormalities such as trisomy 8 are associated with increased risk of disease progression.
  • Immunophenotyping
    • Eosinophil activation markers: CD23, CD25 and CD69
    • Mast cells: KIT (CD117), tryptase and aberrant expression of CD25 (However CD2 is negative, compared to mast cells of systemic mastocytosis)
  • Diagnostic criteria:
    • Essential:
      • A myeloid (more frequent) or lymphoid neoplasm, usually with prominent peripheral and/or tissue eosinophilia
      • Presence of a PDGFRA fusion gene, usually with FIP1L1.
    • Desirable: In the absence of molecular demonstration of the fusion gene, the diagnosis should be suspected if
      • there is a BCR::ABL1-negative myeloproliferative neoplasm with prominent eosinophilia associated with splenomegaly
      • Marked elevation of serum vitamin B12
      • Increased serum tryptase
      • Increased bone marrow mast cells
  • Prognosis: Good
  • Poor prognostic markers include:
    • Blast phase of disease
    • Complex karyotype
    • Cardiac involvement
  • Treatment:
    • Imatinib- Start with 100mg OD, then titrate the dose up to 400mg-OD, depending on AEC.
    • It is useful both in chronic phase and blast crisis
    • Hence, even if patient has manifestation of acute leukaemia- Imatinib has to be given. As these patients can enter into remission with Imatinib alone. 
    • If there is development of resistance (Ex. T674I mutation)- Sorafinib or midostaurin can be used.

 

Myeloid/Lymphoid Neoplasm with PDGFRB Rearrangement

  • PDGFRB mutations occur due to translocations involving chromosome 5q32. Most common counterpart is ETV6 which results from t (5:12).
  • Male predominance
  • Usually seen in 5th decade
  • Presentations:
    • CMML with eosinophilia
    • Atypical CML with eosinophilia
    • JMML
  • Splenomegaly is common
  • BM shows features of dysplasia along with eosinophilia
  • PDGFRB mutation testing can be done by RT-PCR or FISH or RNA sequencing
  • Criteria for diagnosis:
    • Essential:
      • A myeloid or lymphoid neoplasm, often with prominent eosinophilia with varying degrees of neutrophilia or monocytosis associated with the formation of a PDGFRB fusion gene.
      • Cases of BCR::ABL1-like B-ALL without evidence of an associated myeloid neoplasm are excluded from this category.
    • Desirable:
      • Cytogenetic and molecular identification of the partner gene, e.g., t(5;12)(q32;p13.2) with ETV6::PDGFRB or other partner genes.
  • Prognosis: Good. 10 year overall survival when treated with Imatinib is 90%.
  • Treatment- 
    • Standard dose Imatinib
    • In subset of patients with blast crisis Imatinib alone is useful. If there is no response, HSCT needs to be done.

 

Myeloid/Lymphoid Neoplasms with FGFR1 Rearrangement

  • Gene is located on chromosome 8p11.2
  • Presentations include (all have associated eosinophilia):
    • MPN 
    • AML
    • B-ALL
    • T-ALL
    • Mixed phenotype acute leukemia
  • Mild male predominance
  • Mostly seen in 4th decade
  • Testing for FGFR1 can be done by RT-PCR/ FISH
  • Prognosis: Poor. Has aggressive clinical course.
  • Criteria for diagnosis:
    • Essential:
      • Myeloproliferative or myelodysplastic/myeloproliferative neoplasm with prominent eosinophilia, +/- neutrophilia or monocytosis or with increased blasts of myeloid, T-cell or B-cell lineage, or mixed phenotype
      • Demonstration of t(8;13)(p11.2;q12.1) or a different translocation leading to formation of an FGFR1 fusion gene
    • Desirable:
      • Molecular identification of the partner gene of FGFR1
  • Treatment: Pemigatinib/ midostaurin/ Ponatinib- Followed by HSCT (If fit)

 

Myeloid/Lymphoid Neoplasm JAK2 Rearrangement

  • Most common fusion partner is PCM1
  • Can present with
    • MPN with eosinophilia
    • MDS/MPN with eosinophilia
    • ALL
    • AML
  • Male predominance
  • Aggressive clinical course
  • Cytogenetics: Alterations involving 9p24.1 are seen
  • Diagnostic criteria
    • Essential:
      • A myeloid or lymphoid neoplasm, often with prominent eosinophilia and the presence of a JAK2 fusion gene
      • Cases of BCR::ABL1-like B-ALL without evidence of an associated myeloid neoplasm are excluded
    • Desirable:
      • Cytogenetic identification of the translocation. 
      • Molecular identification of the fusion gene, e.g., PCM1::JAK2.
  • Treatment- Ruxolitinib/ Fedratinib (Doses adopted to platelet count). HSCT should be considered irrespective of response to Ruxolitinib.

 

Myeloid/Lymphoid Neoplasms with FLT3 Rearrangement

  • The most common partner gene is ETV6/12p131
  • Others include: BCR, ZMYM2, TRIP11, SPTBN1, GOLGB1, CCDC88C, ZBTB44 and MYO18A
  • May resents as
    • CEL
    • MDS
    • MDS/MPN
    • T- Lymphoblastic lymphoma
    • B- ALL
  • Cytogenetics: Chromosomal rearrangements involving 13q12
  • Diagnostic criteria: A myeloid or lymphoid neoplasm, with or without associated eosinophilia with chromosomal rearrangements leading to the formation of a FLT3 fusion gene.
  • Aggressive clinical course
  • Treatment- Consider sunitinib or sorafenib or midostaurin. Allo HSCT is to be considered at the earliest.

 

Myeloid/Lymphoid Neoplasm with ETV6::ABL1fusion

  • Occurs due to t(9;12)(q34;p13)
  • BM: Similar to CML but has marked eosinophilia
  • Others may present as
    • MDS/MPN
    • CEL
  • Diagnostic criteria:
    • Essential: A haematopoietic (myeloid or lymphoid) neoplasm in chronic phase associated with ETV6::ABL1.
    • Desirable: Cytogenetics: t(9;12)(q34;p13) or complex aberrations involving other chromosomes
  • Prognosis: Poor
  • Treatment: Dasatinib/ Nilotinib/ Imatinib/ bosutinib

 

Myeloid/Lymphoid Neoplasms with other tyrosine kinase gene fusions

  • Present with MDS/MPN with eosinophilia
  • Fusions include: ETV6::FGFR2; ETV6::LYN; ETV6::NTRK3; ANBP2::ALK; BCR::RET and FGFR1OP::RET
  • Criteria for diagnosis:
    • Essential
      •  A myeloid and/or lymphoid neoplasm
      • Detection of a tyrosine kinase fusion gene, other than those specifically defined as distinct entities (i.e., PDGFRA, PDGFRB, FGFR1, JAK2, FLT3, ETV6::ABL1 etc.).
    • Desirable
      • Eosinophilia;
      • Cytogenetic identification of a translocation, suggesting the involvement of a tyrosine kinase gene and prompting the selection of appropriate break apart FISH probes or other molecular investigation
  • Prognosis and treatment: Not well defined

 

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